I will analyze single cell rna seq and spatial transcriptomics data

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Deutschland

Ich spreche Deutsch, Englisch

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Simple Solutions for Complex Biomedical Data

Hi, my name is Jonathan Alles. I am an independent bioinformatics and data engineering consultant. Through my agency, EVOBYTE Digital Biology, I support professionals with biomedical data engineering ...

Level 1

Hat bestimmte Leistungskriterien erfüllt und zeigt großes Potenzial auf dem Marktplatz.

Über diesen Service

Do you need support in analyzing, integrating or interpreting single cell omics data?

I support research teams in data analysis for scRNA-Seq, single cell immune receptor or spatial omics analysis.


Customized analysis are possible: Get in touch for a quote.


What I Offer:

Bioinformatics Analysis

  • Bioinformatic processing of sequencing raw data
  • Aggregation, filtering, cleaning, batch correction
  • Metadata ingestion
  • Clustering and cluster annotation
  • Differential gene expression
  • Trajectory inference
  • GSEA / GO Term Analysis
  • Spatial neighborhood analysis

Visualization & Reporting

  • Jupyter notebook including analysis code
  • Custom PDF or HTML reports
  • Dashboards for data query

Pipeline Development & Automation

  • Automation and scaling of analysis pipelines
  • Database and cloud integration
  • Containerization

Data Curation

  • Collect (single-cell) omics data for a specific indication, therapeutic modality, species,...
  • Mine public data source and databases and return integrated dataset


Tech Stack

Python / Pandas / scVerse / scipy / Jupyter / TF / Bash / Cell Rank / squidpy / scVelo


Let's Build Together!

Have a project in mind? Message me to discuss your requirements, and I'll provide a customized

Programmiersprache:

Python

Technologie:

Jupyter-Notizbuch

Analyse-Typ:

Quantitative Analyse

Qualitative Analyse

Expertise:

Versuchsplanung

Trends

Algorithmen

Cluster-Analyse

Tools:

Andere

Mein Portfolio

Bewertungen

2 Bewertungen für diesen Service
5,0

(2)
(0)
(0)
(0)
(0)
Zusammensetzung der Bewertung
  • Kommunikation
    5
  • Qualität der Lieferung
    5
  • Preis-Leistungs-Verhältnis der Lieferung
    5
Sortieren nach:
Am relevantesten
  • J

    j_chem23

    CA

    Kanada

    5

    Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.

    400 $-600 $

    Preis

    8 Tagen

    Dauer

    Hilfreich?
    Ja
    Nein
  • M

    matteobertelli

    IT

    Italien

    5

    Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...

    600 $-800 $

    Preis

    3 Wochen

    Dauer

    Hilfreich?
    Ja
    Nein
Bewertungen

2 Bewertungen für diesen Service
5,0

(2)
(0)
(0)
(0)
(0)
Zusammensetzung der Bewertung
  • Kommunikation
    5
  • Qualität der Lieferung
    5
  • Preis-Leistungs-Verhältnis der Lieferung
    5
Sortieren nach:
Am relevantesten
  • J

    j_chem23

    CA

    Kanada

    5

    Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.

    400 $-600 $

    Preis

    8 Tagen

    Dauer

    Hilfreich?
    Ja
    Nein
  • M

    matteobertelli

    IT

    Italien

    5

    Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...

    600 $-800 $

    Preis

    3 Wochen

    Dauer

    Hilfreich?
    Ja
    Nein

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