I will do molecular docking, gnina, autodock vina, and pymol interaction analysis

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PhD Chemist, Cheminformatics and Analytical Expert

PhD Chemist with 15+ years of research and teaching experience. I specialize in bridging experimental lab data with modern computational workflows. Expertise includes: • Cheminformatics & Bioinforma...
Über diesen Service

Need precise, publication-ready molecular docking for your research or drug design project? I provide computational chemistry services using AutoDock Vina and GNINA (deep-learning CNN scoring), paired with detailed interaction profiling.

What I Offer:

  • Target & Ligand Preparation: Structure repair, charge assignments, protonation at physiological pH, and energy minimization.
  • Molecular Docking: Grid box optimization (active site or blind docking) using AutoDock Vina and GNINA for robust affinity predictions (kcal/mol).
  • Interaction Profiling: High-resolution 2D maps via BIOVIA Discovery Studio (H-bonds, pi-stacking, salt bridges) and 3D ray-traced visuals in PyMOL.

Deliverables:

  • Docked complex files (.pdb, .pdbqt, .sdf)
  • Fully editable PyMOL session (.pse)
  • High-res 300+ DPI publication-ready figures
  • Summary table of binding energies and key residue contacts

Why Me?

  • Methodologically rigorous, peer-review-standard workflows
  • Deep expertise in computer-aided drug design (CADD)
  • Fast turnaround and clear scientific support

Please message me with your target PDB ID and ligand structures before ordering!


Technologie:

Excel

•

Jupyter-Notizbuch

•

MATLAB

Analyse-Typ:

Quantitative Analyse

•

Qualitative Analyse

Expertise:

Statistiken

Programmiersprache:

Python

•

R

•

SPSS

Tools:

Stata

•

Google Colab

•

Microsoft Excel